Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.57□□□□□ -0.4
VRK1Q99986 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VRK1Q99986 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.57□□□□□ -0.4
VRK1Q99986 POM121L4P-202ENST00000427789 1891 ntBASIC12.57□□□□□ -0.4
VRK1Q99986 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.57□□□□□ -0.4
VRK1Q99986 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.57□□□□□ -0.4
VRK1Q99986 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VRK1Q99986 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
VRK1Q99986 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.57□□□□□ -0.4
VRK1Q99986 AC132192.2-201ENST00000596206 1147 ntBASIC12.57□□□□□ -0.4
VRK1Q99986 AC084346.2-201ENST00000607097 949 ntBASIC12.57□□□□□ -0.4
VRK1Q99986 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
VRK1Q99986 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
VRK1Q99986 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 AC068760.1-201ENST00000493579 1953 ntBASIC12.57□□□□□ -0.4
VRK1Q99986 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 AC023794.5-201ENST00000564380 2157 ntBASIC12.57□□□□□ -0.4
VRK1Q99986 AC244394.1-201ENST00000435000 1665 ntBASIC12.57□□□□□ -0.4
VRK1Q99986 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VRK1Q99986 BEND3P3-201ENST00000611030 2440 ntBASIC12.57□□□□□ -0.4
VRK1Q99986 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VRK1Q99986 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
VRK1Q99986 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VRK1Q99986 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 AL136172.1-201ENST00000598590 1394 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
VRK1Q99986 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VRK1Q99986 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VRK1Q99986 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.56□□□□□ -0.4
VRK1Q99986 SPTLC1P5-201ENST00000450718 252 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 AL035414.1-201ENST00000451327 857 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.56□□□□□ -0.4
VRK1Q99986 AC245884.6-201ENST00000515672 1067 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 AC022217.1-201ENST00000521069 738 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.56□□□□□ -0.4
VRK1Q99986 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 AC026740.1-201ENST00000607068 791 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.56□□□□□ -0.4
VRK1Q99986 AP001505.2-201ENST00000616815 443 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 AL805961.1-203ENST00000641078 1258 ntBASIC12.56□□□□□ -0.4
VRK1Q99986 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VRK1Q99986 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms