Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 AC006987.1-201ENST00000413610 527 ntBASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 AC105129.2-201ENST00000559536 390 ntBASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 AL021707.6-201ENST00000609212 491 ntBASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 AC091812.3-201ENST00000621362 345 ntBASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 AC079336.7-201ENST00000623428 1078 ntBASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 CU633904.3-201ENST00000624042 1029 ntBASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH19Q8TAB3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 KRT8P43-201ENST00000406052 1458 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AC020917.4-201ENST00000623994 1999 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 ACTG1P2-201ENST00000415776 1125 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AL008707.1-201ENST00000422498 534 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 ACTG1P11-201ENST00000425411 1125 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 ISCA2P1-201ENST00000425548 448 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 Z97180.1-201ENST00000445173 988 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AC245884.6-201ENST00000515672 1067 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AC005252.3-201ENST00000623855 2258 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AL445250.1-201ENST00000641671 2259 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 AC108024.1-201ENST00000626286 1721 ntBASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH19Q8TAB3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms