Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC027601.5-201ENST00000624065 2482 ntBASIC11.25□□□□□ -0.61
VPS13CQ709C8 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13CQ709C8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
VPS13CQ709C8 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13CQ709C8 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13CQ709C8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13CQ709C8 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 OR52X1P-201ENST00000446117 914 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 AC012100.1-201ENST00000470304 282 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AP001102.1-201ENST00000528959 409 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 MED11-203ENST00000575284 652 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AC245140.2-201ENST00000624054 1939 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AC020763.3-201ENST00000625095 2904 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 NAA10-205ENST00000393712 908 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AL121994.1-201ENST00000413189 402 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 FAM223B-202ENST00000598177 713 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 FAM223A-202ENST00000625204 713 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 SNORA30.1-201ENST00000363193 129 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 Z84721.1-201ENST00000438841 372 ntBASIC11.24□□□□□ -0.61
VPS13CQ709C8 GYG1-209ENST00000483267 801 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VPS13CQ709C8 NAT9-204ENST00000578822 839 ntTSL 3 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.24□□□□□ -0.61
VPS13CQ709C8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 ALMS1P1-201ENST00000428767 921 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AACSP1-202ENST00000521412 1095 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 MIR4459-201ENST00000581837 66 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VPS13CQ709C8 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 HMGN1P4-201ENST00000419500 290 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 AC105443.1-201ENST00000433754 712 ntBASIC11.23□□□□□ -0.61
VPS13CQ709C8 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC11.23□□□□□ -0.61
VPS13CQ709C8 EEF1GP2-201ENST00000509352 1243 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms