Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 GULOP-201ENST00000454030 748 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 ALDOAP1-201ENST00000491506 1078 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AC233724.9-201ENST00000511694 407 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 RN7SL202P-201ENST00000584410 262 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AC022966.2-201ENST00000587434 367 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 AC008620.2-201ENST00000510294 1569 ntBASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.49□□□□□ -0.25
RSPO4Q2I0M5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 LINC00115-201ENST00000473798 1317 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 POP5-201ENST00000341039 913 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 PHBP10-201ENST00000416467 784 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 HLA-DQB3-203ENST00000425319 356 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 SERPINA7P1-201ENST00000443077 631 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AC015818.1-201ENST00000451011 244 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 JPT1-205ENST00000470924 663 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CETN3-205ENST00000522842 664 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 METTL7AP1-201ENST00000547343 496 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AL139317.2-201ENST00000556998 158 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 SNX20-205ENST00000610485 557 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms