Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
IRX3P78415 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IRX3P78415 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
IRX3P78415 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IRX3P78415 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IRX3P78415 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.46■□□□□ 0.23
IRX3P78415 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
IRX3P78415 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
IRX3P78415 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 AC005912.2-201ENST00000619492 2400 ntBASIC16.46■□□□□ 0.23
IRX3P78415 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
IRX3P78415 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
IRX3P78415 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
IRX3P78415 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 BX679664.3-201ENST00000414070 555 ntBASIC16.46■□□□□ 0.23
IRX3P78415 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.46■□□□□ 0.23
IRX3P78415 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.46■□□□□ 0.23
IRX3P78415 GRPEL2P1-201ENST00000453145 339 ntBASIC16.46■□□□□ 0.23
IRX3P78415 AC113935.1-201ENST00000471722 555 ntBASIC16.46■□□□□ 0.23
IRX3P78415 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 PGAM1P12-201ENST00000505622 748 ntBASIC16.46■□□□□ 0.23
IRX3P78415 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.46■□□□□ 0.23
IRX3P78415 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.46■□□□□ 0.23
IRX3P78415 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.46■□□□□ 0.23
IRX3P78415 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 KRT8P2-201ENST00000556193 944 ntBASIC16.46■□□□□ 0.23
IRX3P78415 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 AC215219.1-201ENST00000400706 1817 ntBASIC16.46■□□□□ 0.23
IRX3P78415 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.46■□□□□ 0.23
IRX3P78415 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 AC025183.3-201ENST00000623526 1482 ntBASIC16.46■□□□□ 0.23
IRX3P78415 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.46■□□□□ 0.23
IRX3P78415 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IRX3P78415 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
IRX3P78415 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
IRX3P78415 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
IRX3P78415 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 AJ011931.1-201ENST00000618749 2492 ntBASIC16.45■□□□□ 0.22
IRX3P78415 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IRX3P78415 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 RNVU1-8-201ENST00000364272 125 ntBASIC16.45■□□□□ 0.22
IRX3P78415 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX3P78415 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 PPP1R2P4-201ENST00000424051 595 ntBASIC16.45■□□□□ 0.22
IRX3P78415 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX3P78415 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.45■□□□□ 0.22
IRX3P78415 AC005740.1-201ENST00000515639 522 ntBASIC16.45■□□□□ 0.22
IRX3P78415 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX3P78415 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.45■□□□□ 0.22
IRX3P78415 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 AP005264.5-201ENST00000590066 467 ntBASIC16.45■□□□□ 0.22
IRX3P78415 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX3P78415 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX3P78415 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.45■□□□□ 0.22
IRX3P78415 AC010976.2-201ENST00000609697 852 ntBASIC16.45■□□□□ 0.22
IRX3P78415 AL359091.4-201ENST00000610052 409 ntBASIC16.45■□□□□ 0.22
IRX3P78415 AL118522.1-201ENST00000611368 560 ntBASIC16.45■□□□□ 0.22
IRX3P78415 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 AC002472.4-201ENST00000641915 272 ntBASIC16.45■□□□□ 0.22
IRX3P78415 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.45■□□□□ 0.22
IRX3P78415 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IRX3P78415 AL354702.1-201ENST00000442006 1960 ntBASIC16.45■□□□□ 0.22
IRX3P78415 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX3P78415 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX3P78415 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.45■□□□□ 0.22
IRX3P78415 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms