Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC15.11■□□□□ 0.01
BRCA2P51587 AC133555.4-201ENST00000569081 152 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC15.11■□□□□ 0.01
BRCA2P51587 AC137723.2-201ENST00000623540 398 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.11■□□□□ 0.01
BRCA2P51587 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BRCA2P51587 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BRCA2P51587 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BRCA2P51587 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCA2P51587 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCA2P51587 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.11■□□□□ 0.01
BRCA2P51587 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.11■□□□□ 0.01
BRCA2P51587 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BRCA2P51587 RPL35P1-201ENST00000450819 370 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 AC105424.1-201ENST00000514583 209 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 AC103810.4-201ENST00000578601 257 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 BIN3-212ENST00000640731 450 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCA2P51587 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
BRCA2P51587 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.11■□□□□ 0.01
BRCA2P51587 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BRCA2P51587 RPL13AP5-201ENST00000439189 612 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC15.11■□□□□ 0.01
BRCA2P51587 RN7SL646P-201ENST00000492969 297 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 AC006273.1-201ENST00000606966 861 ntBASIC15.11■□□□□ 0.01
BRCA2P51587 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BRCA2P51587 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
BRCA2P51587 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCA2P51587 HNRNPA1P9-201ENST00000450624 950 ntBASIC15.1■□□□□ 0.01
BRCA2P51587 TULP3P1-202ENST00000453253 1291 ntBASIC15.1■□□□□ 0.01
BRCA2P51587 AC104212.2-201ENST00000478813 628 ntBASIC15.1■□□□□ 0.01
BRCA2P51587 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCA2P51587 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.1■□□□□ 0.01
BRCA2P51587 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRCA2P51587 SNORA30.1-201ENST00000363193 129 ntBASIC15.1■□□□□ 0.01
BRCA2P51587 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.1■□□□□ 0.01
BRCA2P51587 RN7SL638P-201ENST00000494527 290 ntBASIC15.1■□□□□ 0.01
BRCA2P51587 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC15.1■□□□□ 0.01
BRCA2P51587 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC15.1■□□□□ 0.01
BRCA2P51587 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC15.1■□□□□ 0.01
BRCA2P51587 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
BRCA2P51587 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BRCA2P51587 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.1■□□□□ 0.01
BRCA2P51587 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCA2P51587 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC15.1■□□□□ 0.01
BRCA2P51587 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC15.1■□□□□ 0.01
BRCA2P51587 RN7SL322P-201ENST00000583519 299 ntBASIC15.1■□□□□ 0.01
BRCA2P51587 MED25-209ENST00000612791 881 ntTSL 5 BASIC15.1■□□□□ 0.01
BRCA2P51587 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BRCA2P51587 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCA2P51587 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCA2P51587 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
BRCA2P51587 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BRCA2P51587 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC15.09■□□□□ 0.01
BRCA2P51587 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCA2P51587 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCA2P51587 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
BRCA2P51587 AC113367.3-201ENST00000508316 1912 ntBASIC15.09■□□□□ 0.01
BRCA2P51587 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BRCA2P51587 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCA2P51587 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCA2P51587 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC15.09■□□□□ 0.01
BRCA2P51587 PARVG-208ENST00000466375 820 ntTSL 2 BASIC15.09■□□□□ 0.01
BRCA2P51587 FPGT-205ENST00000482102 561 ntTSL 4 BASIC15.09■□□□□ 0.01
BRCA2P51587 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC15.09■□□□□ 0.01
BRCA2P51587 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms