Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CLK1P49759 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 AC020910.5-201ENST00000623668 1865 ntBASIC13.36□□□□□ -0.27
CLK1P49759 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.36□□□□□ -0.27
CLK1P49759 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 MIR1909-201ENST00000411312 80 ntBASIC13.36□□□□□ -0.27
CLK1P49759 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.36□□□□□ -0.27
CLK1P49759 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.36□□□□□ -0.27
CLK1P49759 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.36□□□□□ -0.27
CLK1P49759 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.36□□□□□ -0.27
CLK1P49759 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.36□□□□□ -0.27
CLK1P49759 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 AC073413.1-201ENST00000603927 732 ntBASIC13.36□□□□□ -0.27
CLK1P49759 MIR6074-201ENST00000612054 107 ntBASIC13.36□□□□□ -0.27
CLK1P49759 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.36□□□□□ -0.27
CLK1P49759 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.36□□□□□ -0.27
CLK1P49759 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.36□□□□□ -0.27
CLK1P49759 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLK1P49759 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 AL031432.4-201ENST00000641729 2190 ntBASIC13.35□□□□□ -0.27
CLK1P49759 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.35□□□□□ -0.27
CLK1P49759 CNN2P10-201ENST00000443067 918 ntBASIC13.35□□□□□ -0.27
CLK1P49759 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLK1P49759 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.35□□□□□ -0.27
CLK1P49759 AP003171.2-201ENST00000528208 925 ntBASIC13.35□□□□□ -0.27
CLK1P49759 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLK1P49759 AC103988.2-201ENST00000561804 725 ntBASIC13.35□□□□□ -0.27
CLK1P49759 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.35□□□□□ -0.27
CLK1P49759 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.35□□□□□ -0.27
CLK1P49759 AC239800.4-201ENST00000603712 296 ntBASIC13.35□□□□□ -0.27
CLK1P49759 AC017083.2-201ENST00000608069 979 ntBASIC13.35□□□□□ -0.27
CLK1P49759 AC133552.6-201ENST00000613406 534 ntBASIC13.35□□□□□ -0.27
CLK1P49759 MIR6805-201ENST00000615055 62 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms