Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC12.69□□□□□ -0.38
ATRXP46100 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC12.69□□□□□ -0.38
ATRXP46100 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC12.69□□□□□ -0.38
ATRXP46100 AL356583.1-201ENST00000398739 1371 ntBASIC12.69□□□□□ -0.38
ATRXP46100 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
ATRXP46100 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
ATRXP46100 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
ATRXP46100 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATRXP46100 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ATRXP46100 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ATRXP46100 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC12.68□□□□□ -0.38
ATRXP46100 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC12.68□□□□□ -0.38
ATRXP46100 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.68□□□□□ -0.38
ATRXP46100 PCTP-206ENST00000573500 919 ntTSL 3 BASIC12.68□□□□□ -0.38
ATRXP46100 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC12.68□□□□□ -0.38
ATRXP46100 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ATRXP46100 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 RNA5SP491-201ENST00000362936 118 ntBASIC12.68□□□□□ -0.38
ATRXP46100 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 MIR766-201ENST00000390223 111 ntBASIC12.68□□□□□ -0.38
ATRXP46100 AL391903.1-201ENST00000407513 365 ntBASIC12.68□□□□□ -0.38
ATRXP46100 AC005011.1-201ENST00000455206 210 ntBASIC12.68□□□□□ -0.38
ATRXP46100 FAM187B2P-201ENST00000577135 713 ntBASIC12.68□□□□□ -0.38
ATRXP46100 AC106872.9-201ENST00000512437 1393 ntBASIC12.68□□□□□ -0.38
ATRXP46100 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 TBC1D27-202ENST00000424239 1573 ntBASIC12.68□□□□□ -0.38
ATRXP46100 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 Z98885.3-201ENST00000624882 1757 ntBASIC12.68□□□□□ -0.38
ATRXP46100 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ATRXP46100 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.68□□□□□ -0.38
ATRXP46100 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC12.67□□□□□ -0.38
ATRXP46100 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC12.67□□□□□ -0.38
ATRXP46100 AKR1C5P-201ENST00000427165 609 ntBASIC12.67□□□□□ -0.38
ATRXP46100 VDAC1P11-201ENST00000458323 852 ntBASIC12.67□□□□□ -0.38
ATRXP46100 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC12.67□□□□□ -0.38
ATRXP46100 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 PHBP18-201ENST00000546648 813 ntBASIC12.67□□□□□ -0.38
ATRXP46100 ADIPOR1P2-201ENST00000554199 820 ntBASIC12.67□□□□□ -0.38
ATRXP46100 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC12.67□□□□□ -0.38
ATRXP46100 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC12.67□□□□□ -0.38
ATRXP46100 MIR5091-201ENST00000578707 93 ntBASIC12.67□□□□□ -0.38
ATRXP46100 AC015818.3-201ENST00000583797 589 ntBASIC12.67□□□□□ -0.38
ATRXP46100 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms