Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NKX2-1P43699 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.59□□□□□ -0.55
NKX2-1P43699 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 RCC2P1-201ENST00000452257 1476 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NKX2-1P43699 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.59□□□□□ -0.55
NKX2-1P43699 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.59□□□□□ -0.55
NKX2-1P43699 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.59□□□□□ -0.55
NKX2-1P43699 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 KRT18P15-201ENST00000458108 1291 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 AC093214.1-201ENST00000511688 1107 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 RNA5SP421-201ENST00000516864 134 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 AC055876.2-201ENST00000531834 546 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 ENPP7P5-201ENST00000541031 1031 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.59□□□□□ -0.55
NKX2-1P43699 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.59□□□□□ -0.55
NKX2-1P43699 AC009955.4-201ENST00000597192 544 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 AC099568.2-201ENST00000609194 695 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 AC004790.1-201ENST00000612686 536 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 AL023775.1-201ENST00000454907 1746 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.59□□□□□ -0.55
NKX2-1P43699 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
NKX2-1P43699 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NKX2-1P43699 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NKX2-1P43699 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
NKX2-1P43699 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.58□□□□□ -0.56
NKX2-1P43699 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.58□□□□□ -0.56
NKX2-1P43699 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
NKX2-1P43699 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.58□□□□□ -0.56
NKX2-1P43699 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.58□□□□□ -0.56
NKX2-1P43699 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.58□□□□□ -0.56
NKX2-1P43699 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NKX2-1P43699 AC092552.1-201ENST00000547243 906 ntBASIC11.58□□□□□ -0.56
NKX2-1P43699 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms