Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
LTBRP36941 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LTBRP36941 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 NAA10-205ENST00000393712 908 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBRP36941 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC14.13□□□□□ -0.15
LTBRP36941 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBRP36941 IQCF4-203ENST00000428561 420 ntBASIC14.13□□□□□ -0.15
LTBRP36941 AC004910.1-201ENST00000433493 787 ntBASIC14.13□□□□□ -0.15
LTBRP36941 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC14.13□□□□□ -0.15
LTBRP36941 RPL10P8-201ENST00000522888 313 ntBASIC14.13□□□□□ -0.15
LTBRP36941 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
LTBRP36941 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBRP36941 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBRP36941 DERL2-206ENST00000572834 589 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBRP36941 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBRP36941 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBRP36941 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBRP36941 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC14.13□□□□□ -0.15
LTBRP36941 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LTBRP36941 AC245369.8-201ENST00000636589 306 ntBASIC14.13□□□□□ -0.15
LTBRP36941 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC14.13□□□□□ -0.15
LTBRP36941 CDIPT-AS1-203ENST00000638164 713 ntBASIC14.13□□□□□ -0.15
LTBRP36941 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBRP36941 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 AC002350.2-201ENST00000623894 1828 ntBASIC14.13□□□□□ -0.15
LTBRP36941 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBRP36941 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBRP36941 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
LTBRP36941 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBRP36941 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBRP36941 RCC2P5-201ENST00000492126 1487 ntBASIC14.12□□□□□ -0.15
LTBRP36941 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LTBRP36941 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 FGD5P1-202ENST00000614866 2498 ntBASIC14.12□□□□□ -0.15
LTBRP36941 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 AC023157.3-201ENST00000619086 2088 ntBASIC14.12□□□□□ -0.15
LTBRP36941 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LTBRP36941 RNA5SP84-201ENST00000364740 107 ntBASIC14.12□□□□□ -0.15
LTBRP36941 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC14.12□□□□□ -0.15
LTBRP36941 SNORA50D-201ENST00000408059 134 ntBASIC14.12□□□□□ -0.15
LTBRP36941 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.12□□□□□ -0.15
LTBRP36941 AL627095.1-201ENST00000414775 321 ntBASIC14.12□□□□□ -0.15
LTBRP36941 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.12□□□□□ -0.15
LTBRP36941 RPL3P9-201ENST00000463217 1183 ntBASIC14.12□□□□□ -0.15
LTBRP36941 RN7SL677P-201ENST00000466970 319 ntBASIC14.12□□□□□ -0.15
LTBRP36941 RN7SL22P-201ENST00000471800 269 ntBASIC14.12□□□□□ -0.15
LTBRP36941 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 RN7SL646P-201ENST00000492969 297 ntBASIC14.12□□□□□ -0.15
LTBRP36941 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 HNRNPA1P72-201ENST00000529511 967 ntBASIC14.12□□□□□ -0.15
LTBRP36941 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC14.12□□□□□ -0.15
LTBRP36941 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 AL136298.3-201ENST00000556746 445 ntBASIC14.12□□□□□ -0.15
LTBRP36941 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LTBRP36941 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.12□□□□□ -0.15
LTBRP36941 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LTBRP36941 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms