Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.2□□□□□ -0.3
NR4A1P22736 RNU1-114P-201ENST00000365297 166 ntBASIC13.2□□□□□ -0.3
NR4A1P22736 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
NR4A1P22736 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NR4A1P22736 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.2□□□□□ -0.3
NR4A1P22736 KLF2P2-201ENST00000416807 1039 ntBASIC13.2□□□□□ -0.3
NR4A1P22736 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.2□□□□□ -0.3
NR4A1P22736 AC112492.5-201ENST00000421897 457 ntBASIC13.2□□□□□ -0.3
NR4A1P22736 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.2□□□□□ -0.3
NR4A1P22736 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.2□□□□□ -0.3
NR4A1P22736 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.2□□□□□ -0.3
NR4A1P22736 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.2□□□□□ -0.3
NR4A1P22736 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.2□□□□□ -0.3
NR4A1P22736 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.2□□□□□ -0.3
NR4A1P22736 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.2□□□□□ -0.3
NR4A1P22736 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.2□□□□□ -0.3
NR4A1P22736 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NR4A1P22736 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NR4A1P22736 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NR4A1P22736 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
NR4A1P22736 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NR4A1P22736 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.2□□□□□ -0.3
NR4A1P22736 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 KRT8P35-201ENST00000483942 1338 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NR4A1P22736 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 AC079776.1-201ENST00000401540 1152 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 BOLA2P3-201ENST00000404566 256 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 AL139094.1-201ENST00000405549 1188 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 AC136604.1-202ENST00000425471 771 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 AC234783.1-201ENST00000441761 496 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 ACA64.2-201ENST00000459014 129 ntBASIC13.19□□□□□ -0.3
NR4A1P22736 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.19□□□□□ -0.3
NR4A1P22736 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.19□□□□□ -0.3
NR4A1P22736 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.19□□□□□ -0.3
NR4A1P22736 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NR4A1P22736 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NR4A1P22736 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms