Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 FPGT-205ENST00000482102 561 ntTSL 4 BASIC23.02■■□□□ 1.28
CFTRP13569 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 AC018868.2-201ENST00000559655 1259 ntBASIC23.02■■□□□ 1.28
CFTRP13569 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC23.02■■□□□ 1.28
CFTRP13569 BIN3-212ENST00000640731 450 ntTSL 5 BASIC23.02■■□□□ 1.28
CFTRP13569 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC23.02■■□□□ 1.28
CFTRP13569 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC23.02■■□□□ 1.28
CFTRP13569 AC097359.2-201ENST00000604992 2389 ntBASIC23.02■■□□□ 1.28
CFTRP13569 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
CFTRP13569 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC23.02■■□□□ 1.27
CFTRP13569 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC23.02■■□□□ 1.27
CFTRP13569 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC23.01■■□□□ 1.27
CFTRP13569 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CFTRP13569 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CFTRP13569 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CFTRP13569 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC23.01■■□□□ 1.27
CFTRP13569 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 HNRNPA1P59-201ENST00000430583 918 ntBASIC23.01■■□□□ 1.27
CFTRP13569 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CFTRP13569 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 KRT18P63-201ENST00000505463 979 ntBASIC23.01■■□□□ 1.27
CFTRP13569 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC23.01■■□□□ 1.27
CFTRP13569 SNORD55-201ENST00000581525 80 ntBASIC23.01■■□□□ 1.27
CFTRP13569 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 CR392039.2-201ENST00000623182 509 ntBASIC23.01■■□□□ 1.27
CFTRP13569 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC23.01■■□□□ 1.27
CFTRP13569 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CFTRP13569 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC23.01■■□□□ 1.27
CFTRP13569 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC23.01■■□□□ 1.27
CFTRP13569 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC23.01■■□□□ 1.27
CFTRP13569 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
CFTRP13569 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 AL928654.5-201ENST00000624831 2501 ntBASIC23.01■■□□□ 1.27
CFTRP13569 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CFTRP13569 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC23.01■■□□□ 1.27
CFTRP13569 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CFTRP13569 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CFTRP13569 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
CFTRP13569 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 COCH-203ENST00000460581 2688 ntTSL 2 BASIC23■■□□□ 1.27
CFTRP13569 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC23■■□□□ 1.27
CFTRP13569 AC138392.1-201ENST00000427577 921 ntBASIC23■■□□□ 1.27
CFTRP13569 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC23■■□□□ 1.27
CFTRP13569 PMM2-216ENST00000569958 698 ntTSL 2 BASIC23■■□□□ 1.27
CFTRP13569 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
CFTRP13569 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CFTRP13569 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC23■■□□□ 1.27
CFTRP13569 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC23■■□□□ 1.27
CFTRP13569 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CFTRP13569 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 TPM3P7-201ENST00000338274 732 ntBASIC22.99■■□□□ 1.27
CFTRP13569 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 HNRNPA1P9-201ENST00000450624 950 ntBASIC22.99■■□□□ 1.27
CFTRP13569 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC22.99■■□□□ 1.27
CFTRP13569 ST3GAL1P1-201ENST00000513810 1014 ntBASIC22.99■■□□□ 1.27
CFTRP13569 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC22.99■■□□□ 1.27
CFTRP13569 FAM213AP2-201ENST00000521579 683 ntBASIC22.99■■□□□ 1.27
CFTRP13569 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC22.99■■□□□ 1.27
CFTRP13569 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 AC140479.7-201ENST00000636301 2332 ntBASIC22.99■■□□□ 1.27
CFTRP13569 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC22.99■■□□□ 1.27
CFTRP13569 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC22.99■■□□□ 1.27
CFTRP13569 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CFTRP13569 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC22.99■■□□□ 1.27
CFTRP13569 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC22.99■■□□□ 1.27
CFTRP13569 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC22.99■■□□□ 1.27
CFTRP13569 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC22.99■■□□□ 1.27
CFTRP13569 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CFTRP13569 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CFTRP13569 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CFTRP13569 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms