Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.06□□□□□ -0.32
BMP4P12644 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.06□□□□□ -0.32
BMP4P12644 PCDHA5-203ENST00000614258 4248 ntBASIC13.06□□□□□ -0.32
BMP4P12644 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BMP4P12644 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.06□□□□□ -0.32
BMP4P12644 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BMP4P12644 AC022400.8-201ENST00000623453 3599 ntBASIC13.06□□□□□ -0.32
BMP4P12644 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BMP4P12644 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
BMP4P12644 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BMP4P12644 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.06□□□□□ -0.32
BMP4P12644 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.06□□□□□ -0.32
BMP4P12644 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.06□□□□□ -0.32
BMP4P12644 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.06□□□□□ -0.32
BMP4P12644 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
BMP4P12644 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BMP4P12644 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
BMP4P12644 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 FAM90A11P-201ENST00000518378 2218 ntBASIC13.05□□□□□ -0.32
BMP4P12644 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 AC102953.2-201ENST00000609755 3026 ntBASIC13.05□□□□□ -0.32
BMP4P12644 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 PCDHB17P-202ENST00000623466 3066 ntBASIC13.05□□□□□ -0.32
BMP4P12644 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
BMP4P12644 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 AL139094.1-201ENST00000405549 1188 ntBASIC13.05□□□□□ -0.32
BMP4P12644 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
BMP4P12644 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.05□□□□□ -0.32
BMP4P12644 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 Z93015.1-201ENST00000451718 390 ntBASIC13.05□□□□□ -0.32
BMP4P12644 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.05□□□□□ -0.32
BMP4P12644 TMEM14EP-202ENST00000639378 1296 ntBASIC13.05□□□□□ -0.32
BMP4P12644 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.05□□□□□ -0.32
BMP4P12644 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.05□□□□□ -0.32
BMP4P12644 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.05□□□□□ -0.32
BMP4P12644 MARK2P9-201ENST00000430958 1727 ntBASIC13.05□□□□□ -0.32
BMP4P12644 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BMP4P12644 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
BMP4P12644 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
BMP4P12644 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
BMP4P12644 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.04□□□□□ -0.32
BMP4P12644 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
BMP4P12644 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
BMP4P12644 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
BMP4P12644 AL445250.1-201ENST00000641671 2259 ntBASIC13.04□□□□□ -0.32
BMP4P12644 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
BMP4P12644 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.04□□□□□ -0.32
BMP4P12644 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.04□□□□□ -0.32
BMP4P12644 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BMP4P12644 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms