Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.36□□□□□ -0.43
SFTPBP07988 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 AL035414.1-201ENST00000451327 857 ntBASIC12.36□□□□□ -0.43
SFTPBP07988 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.36□□□□□ -0.43
SFTPBP07988 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.36□□□□□ -0.43
SFTPBP07988 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.36□□□□□ -0.43
SFTPBP07988 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.36□□□□□ -0.43
SFTPBP07988 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.36□□□□□ -0.43
SFTPBP07988 AC027601.3-201ENST00000622907 509 ntBASIC12.36□□□□□ -0.43
SFTPBP07988 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SFTPBP07988 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 AL445209.1-201ENST00000607269 3491 ntBASIC12.36□□□□□ -0.43
SFTPBP07988 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPBP07988 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPBP07988 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.36□□□□□ -0.43
SFTPBP07988 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.35□□□□□ -0.43
SFTPBP07988 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SFTPBP07988 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.35□□□□□ -0.43
SFTPBP07988 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.35□□□□□ -0.43
SFTPBP07988 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.35□□□□□ -0.43
SFTPBP07988 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
SFTPBP07988 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 KRT8P4-201ENST00000509735 1454 ntBASIC12.35□□□□□ -0.43
SFTPBP07988 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SFTPBP07988 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.35□□□□□ -0.43
SFTPBP07988 MAPK10-262ENST00000641051 5738 ntBASIC12.35□□□□□ -0.43
SFTPBP07988 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SFTPBP07988 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.35□□□□□ -0.43
SFTPBP07988 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.35□□□□□ -0.43
SFTPBP07988 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.35□□□□□ -0.43
SFTPBP07988 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 MIR326-201ENST00000362220 95 ntBASIC12.35□□□□□ -0.43
SFTPBP07988 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SFTPBP07988 AL136309.1-201ENST00000403917 691 ntBASIC12.35□□□□□ -0.43
SFTPBP07988 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms