Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.83■□□□□ 0.44
CHL1O00533 AC132812.1-201ENST00000583145 892 ntBASIC17.83■□□□□ 0.44
CHL1O00533 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CHL1O00533 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.83■□□□□ 0.44
CHL1O00533 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHL1O00533 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHL1O00533 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHL1O00533 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHL1O00533 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHL1O00533 MANEA-AS1-201ENST00000564541 2268 ntBASIC17.83■□□□□ 0.44
CHL1O00533 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHL1O00533 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.83■□□□□ 0.44
CHL1O00533 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CHL1O00533 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHL1O00533 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.83■□□□□ 0.44
CHL1O00533 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHL1O00533 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHL1O00533 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CHL1O00533 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC17.82■□□□□ 0.44
CHL1O00533 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 BEND3P1-201ENST00000421591 1944 ntBASIC17.82■□□□□ 0.44
CHL1O00533 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.82■□□□□ 0.44
CHL1O00533 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHL1O00533 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC17.82■□□□□ 0.44
CHL1O00533 ABCD1P4-201ENST00000399687 604 ntBASIC17.82■□□□□ 0.44
CHL1O00533 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 AL627389.1-201ENST00000413508 1182 ntBASIC17.82■□□□□ 0.44
CHL1O00533 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.82■□□□□ 0.44
CHL1O00533 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.82■□□□□ 0.44
CHL1O00533 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC17.82■□□□□ 0.44
CHL1O00533 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.82■□□□□ 0.44
CHL1O00533 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.82■□□□□ 0.44
CHL1O00533 MIR5196-201ENST00000578146 115 ntBASIC17.82■□□□□ 0.44
CHL1O00533 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CHL1O00533 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHL1O00533 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHL1O00533 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 AC130686.1-201ENST00000622936 2466 ntBASIC17.81■□□□□ 0.44
CHL1O00533 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHL1O00533 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 AL359845.1-201ENST00000458202 1648 ntBASIC17.81■□□□□ 0.44
CHL1O00533 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 PSAT1P2-201ENST00000426107 972 ntBASIC17.81■□□□□ 0.44
CHL1O00533 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.81■□□□□ 0.44
CHL1O00533 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.81■□□□□ 0.44
CHL1O00533 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.81■□□□□ 0.44
CHL1O00533 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.81■□□□□ 0.44
CHL1O00533 ERG-211ENST00000453032 1595 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHL1O00533 AL513497.1-201ENST00000624273 2083 ntBASIC17.81■□□□□ 0.44
CHL1O00533 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHL1O00533 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.81■□□□□ 0.44
CHL1O00533 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms