Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 SPATA3-AS1-201ENST00000414876 3508 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.69□□□□□ -0.7
COLCA2A8K830 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 SPDYE17-201ENST00000412399 783 ntBASIC10.69□□□□□ -0.7
COLCA2A8K830 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.69□□□□□ -0.7
COLCA2A8K830 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC10.69□□□□□ -0.7
COLCA2A8K830 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AL136038.3-201ENST00000561909 1096 ntBASIC10.69□□□□□ -0.7
COLCA2A8K830 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC10.69□□□□□ -0.7
COLCA2A8K830 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 AF228730.6-201ENST00000641497 218 ntBASIC10.69□□□□□ -0.7
COLCA2A8K830 AC084121.3-201ENST00000641716 218 ntBASIC10.69□□□□□ -0.7
COLCA2A8K830 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 Z97205.2-201ENST00000564697 1639 ntBASIC10.69□□□□□ -0.7
COLCA2A8K830 KLK2-203ENST00000391810 2674 ntTSL 2 BASIC10.69□□□□□ -0.7
COLCA2A8K830 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
COLCA2A8K830 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
COLCA2A8K830 IMPDH1P8-201ENST00000413639 1525 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 F10-203ENST00000409306 1450 ntTSL 3 BASIC10.68□□□□□ -0.7
COLCA2A8K830 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 HSPA8P7-201ENST00000443628 1948 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
COLCA2A8K830 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC133065.6-201ENST00000625054 2378 ntBASIC10.68□□□□□ -0.7
COLCA2A8K830 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 API5-208ENST00000531273 1868 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.68□□□□□ -0.7
COLCA2A8K830 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 RAB7B-202ENST00000617991 3014 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 RHD-210ENST00000622561 3007 ntTSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
COLCA2A8K830 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
COLCA2A8K830 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
COLCA2A8K830 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms