Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 FMO6P-201ENST00000236166 1620 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 AC019294.4-201ENST00000561777 2905 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 PCDHA6-201ENST00000378126 3267 ntBASIC11.37□□□□□ -0.59
SRRM4A7MD48 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.37□□□□□ -0.59
SRRM4A7MD48 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SRRM4A7MD48 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 LINC01165-201ENST00000445190 1623 ntBASIC11.36□□□□□ -0.59
SRRM4A7MD48 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CR383656.2-201ENST00000548656 2254 ntBASIC11.36□□□□□ -0.59
SRRM4A7MD48 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CD164-210ENST00000512821 964 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SRRM4A7MD48 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SRRM4A7MD48 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 TUBB1P2-201ENST00000422712 1306 ntBASIC11.35□□□□□ -0.59
SRRM4A7MD48 TUBB1P1-201ENST00000503144 1300 ntBASIC11.35□□□□□ -0.59
SRRM4A7MD48 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SRRM4A7MD48 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SRRM4A7MD48 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms