Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 ST13P19-201ENST00000442505 1124 ntBASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 CHCHD2P9-201ENST00000461726 456 ntBASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 RN7SL277P-201ENST00000481521 288 ntBASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 AC114947.1-202ENST00000514136 344 ntBASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 MST1P2-201ENST00000457982 2291 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 PCDHA5-203ENST00000614258 4248 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 KRT17P5-201ENST00000332088 839 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 MIR557-201ENST00000385239 98 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 AC087392.5-201ENST00000612517 489 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 MIR6842-201ENST00000612539 65 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 YRDCP1-201ENST00000621419 643 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 AL591471.1-201ENST00000621855 229 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 AC064801.2-201ENST00000625052 1303 ntBASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NPIPA1Q9UND3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 KRT8P31-201ENST00000504812 1408 ntBASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 MARK2P16-201ENST00000605714 1723 ntBASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA1Q9UND3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms