Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBX8Q9HC52 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBX8Q9HC52 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CBX8Q9HC52 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CBX8Q9HC52 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.74■□□□□ 0.11
CBX8Q9HC52 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBX8Q9HC52 AC003686.1-201ENST00000550956 1034 ntBASIC15.74■□□□□ 0.11
CBX8Q9HC52 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.74■□□□□ 0.11
CBX8Q9HC52 DUX4L46-201ENST00000566845 751 ntBASIC15.74■□□□□ 0.11
CBX8Q9HC52 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.74■□□□□ 0.11
CBX8Q9HC52 AL355385.1-201ENST00000606123 409 ntBASIC15.74■□□□□ 0.11
CBX8Q9HC52 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBX8Q9HC52 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CBX8Q9HC52 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.74■□□□□ 0.11
CBX8Q9HC52 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CBX8Q9HC52 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CBX8Q9HC52 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 PER1-202ENST00000354903 3115 ntTSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 HSPA8P9-201ENST00000485881 1943 ntBASIC15.73■□□□□ 0.11
CBX8Q9HC52 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 KLF2P1-201ENST00000447438 1042 ntBASIC15.73■□□□□ 0.11
CBX8Q9HC52 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 PPY2P-201ENST00000582808 702 ntBASIC15.73■□□□□ 0.11
CBX8Q9HC52 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 AL591471.1-201ENST00000621855 229 ntBASIC15.73■□□□□ 0.11
CBX8Q9HC52 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 PEG13-201ENST00000631594 5667 ntBASIC15.73■□□□□ 0.11
CBX8Q9HC52 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 AC093462.1-201ENST00000621167 1683 ntBASIC15.73■□□□□ 0.11
CBX8Q9HC52 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CBX8Q9HC52 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CBX8Q9HC52 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 C2orf27AP3-201ENST00000434123 579 ntBASIC15.72■□□□□ 0.11
CBX8Q9HC52 BCRP1-201ENST00000444246 691 ntBASIC15.72■□□□□ 0.11
CBX8Q9HC52 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 MIR4783-201ENST00000580343 82 ntBASIC15.72■□□□□ 0.11
CBX8Q9HC52 AL096865.1-201ENST00000606796 927 ntBASIC15.72■□□□□ 0.11
CBX8Q9HC52 AC244669.2-201ENST00000612320 853 ntBASIC15.72■□□□□ 0.11
CBX8Q9HC52 AL354718.3-201ENST00000616414 581 ntBASIC15.72■□□□□ 0.11
CBX8Q9HC52 CR382287.1-201ENST00000623954 586 ntBASIC15.72■□□□□ 0.11
CBX8Q9HC52 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CBX8Q9HC52 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CBX8Q9HC52 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms