Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 MBL3P-201ENST00000402234 644 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 CDCA4P3-201ENST00000442572 689 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 BCRP5-201ENST00000514371 253 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 AP001979.1-201ENST00000529222 751 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 AC022966.2-201ENST00000587434 367 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 AC023824.1-201ENST00000562945 2975 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 AC073585.1-201ENST00000368895 1328 ntBASIC22.24■■□□□ 1.15
IFT140Q96RY7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 AQP7-207ENST00000447660 998 ntTSL 2 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 AC010442.2-201ENST00000509301 407 ntBASIC22.24■■□□□ 1.15
IFT140Q96RY7 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 AC106782.3-201ENST00000563429 258 ntBASIC22.24■■□□□ 1.15
IFT140Q96RY7 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT140Q96RY7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
IFT140Q96RY7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT140Q96RY7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT140Q96RY7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 AL021407.3-201ENST00000407522 486 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 AC096677.3-201ENST00000413162 387 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC22.22■■□□□ 1.15
IFT140Q96RY7 OR2A15P-201ENST00000463814 900 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 KRT18P63-201ENST00000505463 979 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 EEF1GP2-201ENST00000509352 1243 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT140Q96RY7 ELOBP2-201ENST00000526184 355 ntBASIC22.22■■□□□ 1.15
IFT140Q96RY7 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms