Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 ALG3P1-201ENST00000508806 1114 ntBASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AC107373.2-201ENST00000607735 490 ntBASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 BX539320.1-201ENST00000623759 877 ntBASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AC090114.2-201ENST00000608477 7054 ntBASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 AL162615.1-201ENST00000429893 1653 ntBASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CHCHD1Q96BP2 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 AC087164.2-201ENST00000624514 3130 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 RN7SKP230-201ENST00000365642 335 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 TMPOP1-202ENST00000424642 1267 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 PUDPP3-201ENST00000445368 636 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 ALG1L8P-201ENST00000533887 760 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 AC040169.1-201ENST00000565382 521 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 AC064836.3-201ENST00000607928 673 ntBASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CHCHD1Q96BP2 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms