Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 ALG1L13P-202ENST00000519320 584 ntBASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AP001505.2-201ENST00000616815 443 ntBASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AC004623.1-201ENST00000624592 2127 ntBASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 CR383656.2-201ENST00000548656 2254 ntBASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 LINC00638-201ENST00000555578 2518 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 FRMPD2B-201ENST00000431305 1347 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 KRT17P5-201ENST00000332088 839 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 BX679664.3-201ENST00000414070 555 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AL596276.2-201ENST00000447525 331 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 UPF3AP2-201ENST00000457924 1132 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC113935.1-201ENST00000471722 555 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 MIR3619-201ENST00000579667 83 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC100757.4-201ENST00000626934 759 ntBASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDH19Q8TAB3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDH19Q8TAB3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms