Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.07□□□□□ -0.48
CLDND2Q8NHS1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AL583805.1-201ENST00000391389 531 ntBASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 ST13P19-201ENST00000442505 1124 ntBASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AP000358.1-201ENST00000456260 156 ntBASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 KRT18P9-201ENST00000604826 1300 ntBASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 AC114271.1-201ENST00000612689 2813 ntBASIC12.06□□□□□ -0.48
CLDND2Q8NHS1 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 BANF1P3-201ENST00000412556 261 ntBASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 AL592076.1-201ENST00000424448 303 ntBASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 DUX4L50-201ENST00000455245 715 ntBASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 RN7SL530P-201ENST00000485097 298 ntBASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.05□□□□□ -0.48
CLDND2Q8NHS1 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms