Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AC015909.5-201ENST00000624336 2266 ntBASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC089987.1-201ENST00000551654 2209 ntBASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MIR1908-201ENST00000410394 80 ntBASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 RCC2P8-201ENST00000502779 1035 ntBASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC044849.1-201ENST00000519737 1188 ntBASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MIR3615-201ENST00000581999 87 ntBASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms