Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 PPP1R2P10-201ENST00000393023 595 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 MDC1-209ENST00000613547 830 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 KRT18P40-201ENST00000599859 1571 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 COQ4-202ENST00000372875 928 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 TEDDM2P-201ENST00000414169 786 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AC007312.1-201ENST00000427493 258 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 PLAC9P1-203ENST00000440031 223 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AC136475.9-201ENST00000605240 497 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 TBC1D3P1-201ENST00000590047 1693 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 FAM86FP-201ENST00000338711 969 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 MKL1-204ENST00000402630 747 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AC010677.1-201ENST00000441690 412 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 GOLGA2P10-201ENST00000550961 817 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AL590824.1-201ENST00000403828 1349 ntBASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 BIN3-212ENST00000640731 450 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS13DQ5THJ4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13DQ5THJ4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC024475.2-201ENST00000312173 879 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 MIR193A-201ENST00000384882 88 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC000078.1-201ENST00000420617 682 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC079325.1-201ENST00000430386 857 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 RN7SL477P-201ENST00000488440 286 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 IGHV3OR16-11-201ENST00000565524 349 ntBASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13DQ5THJ4 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms