Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC27Q2M243 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC040160.2-201ENST00000623816 1675 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 GRPEL2P1-201ENST00000453145 339 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC138701.2-201ENST00000553634 226 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 SNORD3B-1-201ENST00000577988 758 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC103691.2-201ENST00000618824 433 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC020763.3-201ENST00000625095 2904 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 AC007326.2-201ENST00000624224 7579 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 MANEA-AS1-201ENST00000564541 2268 ntBASIC18.19■□□□□ 0.5
CCDC27Q2M243 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC27Q2M243 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC27Q2M243 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 RN7SL564P-201ENST00000496309 250 ntBASIC18.18■□□□□ 0.5
CCDC27Q2M243 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 AC012073.1-201ENST00000606114 1108 ntBASIC18.18■□□□□ 0.5
CCDC27Q2M243 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC27Q2M243 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CCDC27Q2M243 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC27Q2M243 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC27Q2M243 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms