Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 TPM3P8-201ENST00000330554 643 ntBASIC12.87□□□□□ -0.35
CXCR4P61073 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CXCR4P61073 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.87□□□□□ -0.35
CXCR4P61073 SSR4P1-201ENST00000415143 412 ntBASIC12.87□□□□□ -0.35
CXCR4P61073 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.87□□□□□ -0.35
CXCR4P61073 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 AC106820.3-201ENST00000561653 397 ntBASIC12.87□□□□□ -0.35
CXCR4P61073 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 AC008825.2-201ENST00000603374 718 ntBASIC12.87□□□□□ -0.35
CXCR4P61073 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CXCR4P61073 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 Z98885.3-201ENST00000624882 1757 ntBASIC12.86□□□□□ -0.35
CXCR4P61073 AC134407.3-201ENST00000624035 2139 ntBASIC12.86□□□□□ -0.35
CXCR4P61073 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 MIR193BHG-211ENST00000641433 5365 ntBASIC12.86□□□□□ -0.35
CXCR4P61073 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.86□□□□□ -0.35
CXCR4P61073 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.86□□□□□ -0.35
CXCR4P61073 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.86□□□□□ -0.35
CXCR4P61073 TSPY16P-201ENST00000449843 468 ntBASIC12.86□□□□□ -0.35
CXCR4P61073 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.86□□□□□ -0.35
CXCR4P61073 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 AC140912.1-201ENST00000577171 1054 ntBASIC12.86□□□□□ -0.35
CXCR4P61073 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 AC021016.3-201ENST00000608367 477 ntBASIC12.86□□□□□ -0.35
CXCR4P61073 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.86□□□□□ -0.35
CXCR4P61073 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCR4P61073 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CXCR4P61073 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CXCR4P61073 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCR4P61073 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms