Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S2P56377 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S2P56377 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AP1S2P56377 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S2P56377 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.74□□□□□ -0.21
AP1S2P56377 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.74□□□□□ -0.21
AP1S2P56377 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.74□□□□□ -0.21
AP1S2P56377 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S2P56377 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S2P56377 AC025183.3-201ENST00000623526 1482 ntBASIC13.74□□□□□ -0.21
AP1S2P56377 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S2P56377 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S2P56377 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 SNORA50C-201ENST00000408535 133 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 BX284668.4-201ENST00000453917 508 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.73□□□□□ -0.21
AP1S2P56377 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 AC005740.1-201ENST00000515639 522 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.73□□□□□ -0.21
AP1S2P56377 AC015967.2-201ENST00000624092 234 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 AC006435.4-201ENST00000625037 234 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 SNORA50.1-201ENST00000628590 135 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 AL356737.1-201ENST00000634391 234 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S2P56377 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 AC135782.3-201ENST00000562782 2105 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
AP1S2P56377 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 AC004554.1-201ENST00000422830 1468 ntBASIC13.73□□□□□ -0.21
AP1S2P56377 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AP1S2P56377 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AP1S2P56377 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.73□□□□□ -0.21
AP1S2P56377 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S2P56377 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.72□□□□□ -0.21
AP1S2P56377 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.72□□□□□ -0.21
AP1S2P56377 FMO6P-201ENST00000236166 1620 ntBASIC13.72□□□□□ -0.21
AP1S2P56377 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S2P56377 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.72□□□□□ -0.21
AP1S2P56377 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S2P56377 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
AP1S2P56377 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.72□□□□□ -0.21
AP1S2P56377 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S2P56377 CYP46A4P-201ENST00000414953 267 ntBASIC13.72□□□□□ -0.21
AP1S2P56377 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S2P56377 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
AP1S2P56377 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.72□□□□□ -0.21
AP1S2P56377 POU5F1P2-201ENST00000521750 823 ntBASIC13.72□□□□□ -0.21
AP1S2P56377 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
AP1S2P56377 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S2P56377 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.72□□□□□ -0.21
AP1S2P56377 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
AP1S2P56377 AC091544.8-201ENST00000619490 361 ntBASIC13.72□□□□□ -0.21
AP1S2P56377 AC079336.7-201ENST00000623428 1078 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms