Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 AC093462.1-201ENST00000621167 1683 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
GFRA1P56159 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 OR2I1P-210ENST00000642037 4691 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 AC117489.1-201ENST00000625169 3217 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
GFRA1P56159 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.57□□□□□ -0.4
GFRA1P56159 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.57□□□□□ -0.4
GFRA1P56159 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 AC092638.2-201ENST00000441105 947 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.57□□□□□ -0.4
GFRA1P56159 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.57□□□□□ -0.4
GFRA1P56159 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 CR383656.3-201ENST00000551315 183 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 AC073911.3-201ENST00000624401 631 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 LINC00244-201ENST00000625073 613 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 FMO6P-201ENST00000236166 1620 ntBASIC12.57□□□□□ -0.4
GFRA1P56159 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.57□□□□□ -0.4
GFRA1P56159 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
GFRA1P56159 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GFRA1P56159 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.56□□□□□ -0.4
GFRA1P56159 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.56□□□□□ -0.4
GFRA1P56159 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.56□□□□□ -0.4
GFRA1P56159 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GFRA1P56159 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 AGAP10P-201ENST00000454844 2418 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
GFRA1P56159 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.56□□□□□ -0.4
GFRA1P56159 OR52M2P-201ENST00000414298 959 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 EEF1DP2-201ENST00000433698 843 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.56□□□□□ -0.4
GFRA1P56159 RN7SL8P-201ENST00000461771 266 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 PRSS3P1-201ENST00000503996 742 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 IGHV1-12-201ENST00000518307 205 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
GFRA1P56159 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GFRA1P56159 RN7SL357P-201ENST00000581065 298 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 KRT18P8-201ENST00000581937 1246 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 MIR5572-201ENST00000583188 137 ntBASIC12.56□□□□□ -0.4
GFRA1P56159 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms