Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.9□□□□□ -0.02
TUBP50607 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.9□□□□□ -0.02
TUBP50607 OR8T1P-201ENST00000421347 918 ntBASIC14.9□□□□□ -0.02
TUBP50607 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.9□□□□□ -0.02
TUBP50607 NDUFS6P1-201ENST00000485187 316 ntBASIC14.9□□□□□ -0.02
TUBP50607 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.9□□□□□ -0.02
TUBP50607 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TUBP50607 AL512310.5-201ENST00000551999 515 ntBASIC14.9□□□□□ -0.02
TUBP50607 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TUBP50607 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TUBP50607 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 AC006480.2-201ENST00000609770 1337 ntBASIC14.9□□□□□ -0.02
TUBP50607 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TUBP50607 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TUBP50607 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.89□□□□□ -0.03
TUBP50607 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TUBP50607 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 AC007952.5-201ENST00000572818 1486 ntBASIC14.89□□□□□ -0.03
TUBP50607 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.89□□□□□ -0.03
TUBP50607 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TUBP50607 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TUBP50607 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 MIR33B-201ENST00000385104 96 ntBASIC14.89□□□□□ -0.03
TUBP50607 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.89□□□□□ -0.03
TUBP50607 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.89□□□□□ -0.03
TUBP50607 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.89□□□□□ -0.03
TUBP50607 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 AL031713.1-201ENST00000564813 661 ntBASIC14.89□□□□□ -0.03
TUBP50607 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 AC138894.2-201ENST00000602838 371 ntBASIC14.89□□□□□ -0.03
TUBP50607 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.89□□□□□ -0.03
TUBP50607 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.89□□□□□ -0.03
TUBP50607 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.89□□□□□ -0.03
TUBP50607 SHMT1P1-201ENST00000419974 1312 ntBASIC14.89□□□□□ -0.03
TUBP50607 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.89□□□□□ -0.03
TUBP50607 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.89□□□□□ -0.03
TUBP50607 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TUBP50607 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TUBP50607 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.88□□□□□ -0.03
TUBP50607 AL022313.4-201ENST00000562756 2046 ntBASIC14.88□□□□□ -0.03
TUBP50607 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TUBP50607 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TUBP50607 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.88□□□□□ -0.03
TUBP50607 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.88□□□□□ -0.03
TUBP50607 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TUBP50607 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TUBP50607 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms