Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
BRCC3P46736 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
BRCC3P46736 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.9□□□□□ -0.02
BRCC3P46736 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 AC006529.1-201ENST00000459978 637 ntBASIC14.9□□□□□ -0.02
BRCC3P46736 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.9□□□□□ -0.02
BRCC3P46736 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
BRCC3P46736 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.9□□□□□ -0.02
BRCC3P46736 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.9□□□□□ -0.02
BRCC3P46736 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 CTBP2P8-201ENST00000422584 1330 ntBASIC14.9□□□□□ -0.02
BRCC3P46736 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCC3P46736 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCC3P46736 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BRCC3P46736 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 AC061965.1-201ENST00000560524 1465 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 PES1P2-201ENST00000449745 1735 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
BRCC3P46736 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
BRCC3P46736 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
BRCC3P46736 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 OR2W2P-201ENST00000406313 909 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
BRCC3P46736 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 AC005722.1-201ENST00000431878 964 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.89□□□□□ -0.03
BRCC3P46736 RN7SL396P-201ENST00000471086 295 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 AC093300.1-201ENST00000510368 1201 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 COQ10BP2-201ENST00000513804 724 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.89□□□□□ -0.03
BRCC3P46736 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 AC012073.1-201ENST00000606114 1108 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 AC011471.3-201ENST00000623576 402 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 AL451007.2-201ENST00000632004 563 ntBASIC14.89□□□□□ -0.03
BRCC3P46736 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
BRCC3P46736 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
BRCC3P46736 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.89□□□□□ -0.03
BRCC3P46736 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCC3P46736 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms