Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
NKX2-1P43699 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.61□□□□□ -0.55
NKX2-1P43699 PMS2P2-201ENST00000425039 1128 ntBASIC11.61□□□□□ -0.55
NKX2-1P43699 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-1P43699 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-1P43699 AL391280.1-201ENST00000506969 1062 ntBASIC11.61□□□□□ -0.55
NKX2-1P43699 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-1P43699 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-1P43699 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.61□□□□□ -0.55
NKX2-1P43699 AC133539.2-201ENST00000604757 467 ntBASIC11.61□□□□□ -0.55
NKX2-1P43699 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.61□□□□□ -0.55
NKX2-1P43699 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
NKX2-1P43699 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.61□□□□□ -0.55
NKX2-1P43699 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
NKX2-1P43699 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 AC025183.3-201ENST00000623526 1482 ntBASIC11.61□□□□□ -0.55
NKX2-1P43699 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.61□□□□□ -0.55
NKX2-1P43699 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
NKX2-1P43699 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-1P43699 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 AP003969.2-201ENST00000623739 2275 ntBASIC11.61□□□□□ -0.55
NKX2-1P43699 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-1P43699 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-1P43699 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 AC104758.3-203ENST00000562938 2123 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.6□□□□□ -0.55
NKX2-1P43699 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 AC004890.2-204ENST00000481968 304 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.6□□□□□ -0.55
NKX2-1P43699 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.6□□□□□ -0.55
NKX2-1P43699 RFPL4AP1-201ENST00000530883 850 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 AP001063.1-201ENST00000568332 529 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
NKX2-1P43699 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.6□□□□□ -0.55
NKX2-1P43699 MIR8072-201ENST00000614241 80 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 ENPP7P14-201ENST00000621765 1040 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.6□□□□□ -0.55
NKX2-1P43699 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
NKX2-1P43699 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-1P43699 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-1P43699 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.59□□□□□ -0.55
NKX2-1P43699 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
NKX2-1P43699 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NKX2-1P43699 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms