Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKN2BP42772 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
CDKN2BP42772 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDKN2BP42772 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CDKN2BP42772 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 RN7SKP214-201ENST00000364208 315 ntBASIC14.54□□□□□ -0.08
CDKN2BP42772 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKN2BP42772 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.54□□□□□ -0.08
CDKN2BP42772 BX679664.3-201ENST00000414070 555 ntBASIC14.54□□□□□ -0.08
CDKN2BP42772 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.54□□□□□ -0.08
CDKN2BP42772 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 AC113935.1-201ENST00000471722 555 ntBASIC14.54□□□□□ -0.08
CDKN2BP42772 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKN2BP42772 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 KRT8P1-201ENST00000557533 1207 ntBASIC14.54□□□□□ -0.08
CDKN2BP42772 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.54□□□□□ -0.08
CDKN2BP42772 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKN2BP42772 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKN2BP42772 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDKN2BP42772 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKN2BP42772 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDKN2BP42772 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKN2BP42772 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 AP002761.4-201ENST00000565433 3361 ntBASIC14.53□□□□□ -0.08
CDKN2BP42772 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDKN2BP42772 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDKN2BP42772 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 AC006987.1-201ENST00000413610 527 ntBASIC14.53□□□□□ -0.08
CDKN2BP42772 DUX4L50-201ENST00000455245 715 ntBASIC14.53□□□□□ -0.08
CDKN2BP42772 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKN2BP42772 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKN2BP42772 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKN2BP42772 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.53□□□□□ -0.08
CDKN2BP42772 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.53□□□□□ -0.08
CDKN2BP42772 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2BP42772 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2BP42772 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms