Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 KRT17P5-201ENST00000332088 839 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 SNORA50C-201ENST00000408535 133 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 BX679664.3-201ENST00000414070 555 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.36□□□□□ -0.11
PTPN3P26045 BX284668.4-201ENST00000453917 508 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.36□□□□□ -0.11
PTPN3P26045 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.36□□□□□ -0.11
PTPN3P26045 AC113935.1-201ENST00000471722 555 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 AC090857.1-201ENST00000527400 390 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.36□□□□□ -0.11
PTPN3P26045 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 AC079336.7-201ENST00000623428 1078 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 SNORA50.1-201ENST00000628590 135 ntBASIC14.36□□□□□ -0.11
PTPN3P26045 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PTPN3P26045 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PTPN3P26045 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PTPN3P26045 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.35□□□□□ -0.11
PTPN3P26045 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 MIR1247-201ENST00000408206 136 ntBASIC14.35□□□□□ -0.11
PTPN3P26045 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.35□□□□□ -0.11
PTPN3P26045 CYP46A4P-201ENST00000414953 267 ntBASIC14.35□□□□□ -0.11
PTPN3P26045 ACTG1P2-201ENST00000415776 1125 ntBASIC14.35□□□□□ -0.11
PTPN3P26045 ACTG1P11-201ENST00000425411 1125 ntBASIC14.35□□□□□ -0.11
PTPN3P26045 ISCA2P1-201ENST00000425548 448 ntBASIC14.35□□□□□ -0.11
PTPN3P26045 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.35□□□□□ -0.11
PTPN3P26045 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.35□□□□□ -0.11
PTPN3P26045 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.35□□□□□ -0.11
PTPN3P26045 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.35□□□□□ -0.11
PTPN3P26045 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.35□□□□□ -0.11
PTPN3P26045 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.35□□□□□ -0.11
PTPN3P26045 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.35□□□□□ -0.11
PTPN3P26045 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PTPN3P26045 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTPN3P26045 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTPN3P26045 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
PTPN3P26045 PPT1-213ENST00000641319 2388 ntBASIC14.34□□□□□ -0.11
PTPN3P26045 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTPN3P26045 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTPN3P26045 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTPN3P26045 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms