Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.93□□□□□ -0.5
COL8A2P25067 AC152010.1-201ENST00000415779 2006 ntBASIC11.93□□□□□ -0.5
COL8A2P25067 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
COL8A2P25067 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 AC105206.1-202ENST00000314927 2368 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 AC099521.3-201ENST00000624251 2938 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
COL8A2P25067 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.92□□□□□ -0.5
COL8A2P25067 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 IGF1-203ENST00000392904 761 ntTSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 HIST2H2BA-201ENST00000412169 381 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 BX679664.3-201ENST00000414070 555 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 AL512306.1-201ENST00000432698 848 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC11.92□□□□□ -0.5
COL8A2P25067 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC11.92□□□□□ -0.5
COL8A2P25067 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
COL8A2P25067 AC113935.1-201ENST00000471722 555 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC11.92□□□□□ -0.5
COL8A2P25067 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.92□□□□□ -0.5
COL8A2P25067 DNM1P30-201ENST00000563586 452 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 RN7SL736P-201ENST00000613111 269 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
COL8A2P25067 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
COL8A2P25067 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.92□□□□□ -0.5
COL8A2P25067 LINC02486-201ENST00000604157 3000 ntBASIC11.92□□□□□ -0.5
COL8A2P25067 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
COL8A2P25067 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
COL8A2P25067 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.91□□□□□ -0.5
COL8A2P25067 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
COL8A2P25067 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 AC020910.6-201ENST00000623084 1459 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
COL8A2P25067 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 USP17L6P-201ENST00000382470 1197 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC11.91□□□□□ -0.5
COL8A2P25067 RPL17P11-201ENST00000417593 544 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 ERP29P1-201ENST00000442902 706 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 AC018638.5-201ENST00000450885 754 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC11.91□□□□□ -0.5
COL8A2P25067 SCARNA12-201ENST00000459155 270 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 CFL1-206ENST00000527344 962 ntTSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms