Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.84□□□□□ -0.19
PCNAP12004 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PCNAP12004 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PCNAP12004 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.83□□□□□ -0.19
PCNAP12004 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.83□□□□□ -0.19
PCNAP12004 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PCNAP12004 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PCNAP12004 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PCNAP12004 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PCNAP12004 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
PCNAP12004 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 FAM86HP-204ENST00000513466 959 ntBASIC13.83□□□□□ -0.2
PCNAP12004 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.83□□□□□ -0.2
PCNAP12004 PGAM1P5-201ENST00000548011 764 ntBASIC13.83□□□□□ -0.2
PCNAP12004 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.83□□□□□ -0.2
PCNAP12004 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.83□□□□□ -0.2
PCNAP12004 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 AC114271.1-201ENST00000612689 2813 ntBASIC13.83□□□□□ -0.2
PCNAP12004 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.83□□□□□ -0.2
PCNAP12004 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PCNAP12004 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCNAP12004 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PCNAP12004 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 CCT8L1P-201ENST00000465400 1674 ntBASIC13.82□□□□□ -0.2
PCNAP12004 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 AC018629.1-201ENST00000623381 1736 ntBASIC13.82□□□□□ -0.2
PCNAP12004 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
PCNAP12004 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PCNAP12004 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCNAP12004 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PCNAP12004 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms