Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.88■□□□□ 0.13
TPM3P06753 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.88■□□□□ 0.13
TPM3P06753 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.88■□□□□ 0.13
TPM3P06753 LINC02084-201ENST00000606069 1096 ntBASIC15.88■□□□□ 0.13
TPM3P06753 AC093512.1-201ENST00000617969 520 ntBASIC15.88■□□□□ 0.13
TPM3P06753 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM3P06753 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TPM3P06753 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM3P06753 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 AC104758.3-203ENST00000562938 2123 ntBASIC15.88■□□□□ 0.13
TPM3P06753 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM3P06753 AL358781.1-202ENST00000321081 1360 ntBASIC15.87■□□□□ 0.13
TPM3P06753 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.87■□□□□ 0.13
TPM3P06753 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TPM3P06753 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM3P06753 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 AC098850.1-201ENST00000419919 790 ntBASIC15.87■□□□□ 0.13
TPM3P06753 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.87■□□□□ 0.13
TPM3P06753 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM3P06753 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 AC008825.2-201ENST00000603374 718 ntBASIC15.87■□□□□ 0.13
TPM3P06753 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TPM3P06753 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM3P06753 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM3P06753 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM3P06753 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM3P06753 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM3P06753 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM3P06753 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TPM3P06753 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM3P06753 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM3P06753 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.86■□□□□ 0.13
TPM3P06753 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM3P06753 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM3P06753 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TPM3P06753 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM3P06753 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms