Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.73□□□□□ -0.05
RB1P06400 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RB1P06400 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.73□□□□□ -0.05
RB1P06400 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RB1P06400 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RB1P06400 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.73□□□□□ -0.05
RB1P06400 AC005722.1-201ENST00000431878 964 ntBASIC14.73□□□□□ -0.05
RB1P06400 AL773545.2-201ENST00000442149 472 ntBASIC14.73□□□□□ -0.05
RB1P06400 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 RPL29P2-201ENST00000488409 460 ntBASIC14.73□□□□□ -0.05
RB1P06400 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.73□□□□□ -0.05
RB1P06400 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.73□□□□□ -0.05
RB1P06400 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.73□□□□□ -0.05
RB1P06400 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.73□□□□□ -0.05
RB1P06400 AC026120.2-201ENST00000617239 309 ntBASIC14.73□□□□□ -0.05
RB1P06400 AC020904.3-201ENST00000624199 442 ntBASIC14.73□□□□□ -0.05
RB1P06400 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RB1P06400 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
RB1P06400 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.73□□□□□ -0.05
RB1P06400 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RB1P06400 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.73□□□□□ -0.05
RB1P06400 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RB1P06400 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.72□□□□□ -0.05
RB1P06400 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.72□□□□□ -0.05
RB1P06400 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RB1P06400 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.72□□□□□ -0.05
RB1P06400 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RB1P06400 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RB1P06400 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.72□□□□□ -0.05
RB1P06400 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.72□□□□□ -0.05
RB1P06400 RPL18AP16-201ENST00000424057 531 ntBASIC14.72□□□□□ -0.05
RB1P06400 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.72□□□□□ -0.05
RB1P06400 AC112250.1-201ENST00000504640 745 ntBASIC14.72□□□□□ -0.05
RB1P06400 GRAMD4P6-201ENST00000556999 244 ntBASIC14.72□□□□□ -0.05
RB1P06400 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.72□□□□□ -0.05
RB1P06400 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.72□□□□□ -0.05
RB1P06400 AC010531.8-201ENST00000623341 685 ntBASIC14.72□□□□□ -0.05
RB1P06400 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.72□□□□□ -0.05
RB1P06400 TNRC18P2-201ENST00000417666 2714 ntBASIC14.72□□□□□ -0.05
RB1P06400 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RB1P06400 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RB1P06400 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.72□□□□□ -0.05
RB1P06400 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 GUCY2EP-203ENST00000531117 1918 ntBASIC14.72□□□□□ -0.05
RB1P06400 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RB1P06400 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.72□□□□□ -0.05
RB1P06400 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RB1P06400 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RB1P06400 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RB1P06400 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 AL008638.4-201ENST00000624792 1315 ntBASIC14.71□□□□□ -0.05
RB1P06400 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC14.71□□□□□ -0.05
RB1P06400 AL359092.2-201ENST00000423330 585 ntBASIC14.71□□□□□ -0.05
RB1P06400 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.71□□□□□ -0.05
RB1P06400 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.71□□□□□ -0.05
RB1P06400 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RB1P06400 ANKRD26P1-203ENST00000569528 966 ntBASIC14.71□□□□□ -0.05
RB1P06400 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RB1P06400 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.71□□□□□ -0.05
RB1P06400 AL357143.1-203ENST00000639750 881 ntBASIC14.71□□□□□ -0.05
RB1P06400 AL139424.3-202ENST00000641619 917 ntBASIC14.71□□□□□ -0.05
RB1P06400 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms