Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 AC145285.5-201ENST00000562217 361 ntBASIC16.82■□□□□ 0.28
CHGBP05060 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.82■□□□□ 0.28
CHGBP05060 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.82■□□□□ 0.28
CHGBP05060 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.82■□□□□ 0.28
CHGBP05060 AC004623.1-201ENST00000624592 2127 ntBASIC16.82■□□□□ 0.28
CHGBP05060 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHGBP05060 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHGBP05060 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.82■□□□□ 0.28
CHGBP05060 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.81■□□□□ 0.28
CHGBP05060 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 TEKT4P2-202ENST00000559466 1312 ntBASIC16.81■□□□□ 0.28
CHGBP05060 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
CHGBP05060 RN7SKP109-201ENST00000410592 316 ntBASIC16.81■□□□□ 0.28
CHGBP05060 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.81■□□□□ 0.28
CHGBP05060 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.81■□□□□ 0.28
CHGBP05060 AC005722.1-201ENST00000431878 964 ntBASIC16.81■□□□□ 0.28
CHGBP05060 AK2P2-201ENST00000439142 405 ntBASIC16.81■□□□□ 0.28
CHGBP05060 CHCHD2P9-201ENST00000461726 456 ntBASIC16.81■□□□□ 0.28
CHGBP05060 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.81■□□□□ 0.28
CHGBP05060 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 RNA5SP417-201ENST00000516459 108 ntBASIC16.81■□□□□ 0.28
CHGBP05060 AC138701.2-201ENST00000553634 226 ntBASIC16.81■□□□□ 0.28
CHGBP05060 AL132994.1-201ENST00000554098 400 ntBASIC16.81■□□□□ 0.28
CHGBP05060 AC068867.1-201ENST00000559855 150 ntBASIC16.81■□□□□ 0.28
CHGBP05060 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CHGBP05060 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.81■□□□□ 0.28
CHGBP05060 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.81■□□□□ 0.28
CHGBP05060 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHGBP05060 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.8■□□□□ 0.28
CHGBP05060 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.8■□□□□ 0.28
CHGBP05060 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 CR383656.2-201ENST00000548656 2254 ntBASIC16.8■□□□□ 0.28
CHGBP05060 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHGBP05060 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 PES1P2-201ENST00000449745 1735 ntBASIC16.8■□□□□ 0.28
CHGBP05060 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHGBP05060 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.8■□□□□ 0.28
CHGBP05060 LINC00265-2P-201ENST00000413372 782 ntBASIC16.8■□□□□ 0.28
CHGBP05060 OR52M2P-201ENST00000414298 959 ntBASIC16.8■□□□□ 0.28
CHGBP05060 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.8■□□□□ 0.28
CHGBP05060 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.8■□□□□ 0.28
CHGBP05060 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 AP000911.2-201ENST00000534330 502 ntBASIC16.8■□□□□ 0.28
CHGBP05060 KRT8P2-201ENST00000556193 944 ntBASIC16.8■□□□□ 0.28
CHGBP05060 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 MIR4722-201ENST00000578292 60 ntBASIC16.8■□□□□ 0.28
CHGBP05060 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.8■□□□□ 0.28
CHGBP05060 AL353726.2-201ENST00000623259 884 ntBASIC16.8■□□□□ 0.28
CHGBP05060 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHGBP05060 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHGBP05060 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.8■□□□□ 0.28
CHGBP05060 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.8■□□□□ 0.28
CHGBP05060 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms