Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC018445.4-201ENST00000624066 2291 ntBASIC11.87□□□□□ -0.51
CD74P04233 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 AC055876.3-201ENST00000431496 288 ntBASIC11.87□□□□□ -0.51
CD74P04233 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.87□□□□□ -0.51
CD74P04233 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.87□□□□□ -0.51
CD74P04233 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.87□□□□□ -0.51
CD74P04233 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.87□□□□□ -0.51
CD74P04233 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 DUX4L27-201ENST00000554796 1261 ntBASIC11.87□□□□□ -0.51
CD74P04233 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 AL358472.3-201ENST00000608147 415 ntBASIC11.87□□□□□ -0.51
CD74P04233 AC138649.4-201ENST00000612222 287 ntBASIC11.87□□□□□ -0.51
CD74P04233 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 CU634019.7-201ENST00000624153 1185 ntBASIC11.87□□□□□ -0.51
CD74P04233 FP236241.2-201ENST00000624906 1185 ntBASIC11.87□□□□□ -0.51
CD74P04233 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.87□□□□□ -0.51
CD74P04233 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 AL008718.2-201ENST00000609206 1313 ntBASIC11.86□□□□□ -0.51
CD74P04233 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.86□□□□□ -0.51
CD74P04233 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.86□□□□□ -0.51
CD74P04233 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
CD74P04233 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 TUBB2BP1-201ENST00000404155 871 ntBASIC11.86□□□□□ -0.51
CD74P04233 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.86□□□□□ -0.51
CD74P04233 SSR4P1-201ENST00000415143 412 ntBASIC11.86□□□□□ -0.51
CD74P04233 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.86□□□□□ -0.51
CD74P04233 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.86□□□□□ -0.51
CD74P04233 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 AC012441.1-201ENST00000446669 685 ntBASIC11.86□□□□□ -0.51
CD74P04233 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.86□□□□□ -0.51
CD74P04233 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.86□□□□□ -0.51
CD74P04233 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 AC022217.1-201ENST00000521069 738 ntBASIC11.86□□□□□ -0.51
CD74P04233 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.86□□□□□ -0.51
CD74P04233 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 CTBP2P3-201ENST00000585629 1255 ntBASIC11.86□□□□□ -0.51
CD74P04233 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.86□□□□□ -0.51
CD74P04233 OR10B1P-201ENST00000601666 907 ntBASIC11.86□□□□□ -0.51
CD74P04233 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.86□□□□□ -0.51
CD74P04233 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.86□□□□□ -0.51
CD74P04233 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 AC008040.5-201ENST00000599781 1781 ntBASIC11.86□□□□□ -0.51
CD74P04233 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD74P04233 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CD74P04233 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms