Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 SNORA50C-201ENST00000408535 133 ntBASIC13.32□□□□□ -0.28
LPCAT4Q643R3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 AC007431.3-201ENST00000623221 587 ntBASIC13.32□□□□□ -0.28
LPCAT4Q643R3 SNORA50.1-201ENST00000628590 135 ntBASIC13.32□□□□□ -0.28
LPCAT4Q643R3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 CTAGE13P-201ENST00000416709 2446 ntBASIC13.32□□□□□ -0.28
LPCAT4Q643R3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LPCAT4Q643R3 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AL139400.1-201ENST00000366220 510 ntBASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 DNAJB3-201ENST00000446806 729 ntBASIC13.31□□□□□ -0.28
LPCAT4Q643R3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 YBX1P5-201ENST00000509441 847 ntBASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AC036164.1-201ENST00000570544 333 ntBASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AC010327.4-202ENST00000591484 748 ntBASIC13.31□□□□□ -0.28
LPCAT4Q643R3 FP325330.2-201ENST00000624219 5630 ntBASIC13.31□□□□□ -0.28
LPCAT4Q643R3 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LPCAT4Q643R3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LPCAT4Q643R3 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LPCAT4Q643R3 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LPCAT4Q643R3 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LPCAT4Q643R3 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.3□□□□□ -0.28
LPCAT4Q643R3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.3□□□□□ -0.28
LPCAT4Q643R3 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LPCAT4Q643R3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms