Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC008038.1-201ENST00000634247 1314 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 MIR339-201ENST00000362153 94 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 DNM1P46-202ENST00000415963 882 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC092865.2-201ENST00000439409 971 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 ABCC6P1-203ENST00000565566 1170 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC006986.1-201ENST00000612764 241 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC008622.3-201ENST00000621170 600 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC005865.2-202ENST00000635814 725 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AC104640.1-201ENST00000562617 2109 ntBASIC17.33■□□□□ 0.36
RC3H1Q5TC82 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RC3H1Q5TC82 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 SERF2-204ENST00000402131 586 ntTSL 2 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 RPL14-203ENST00000416518 812 ntTSL 3 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 RN7SL672P-201ENST00000474091 317 ntBASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AF186996.6-201ENST00000485294 149 ntBASIC17.32■□□□□ 0.36
RC3H1Q5TC82 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 ACTBP9-201ENST00000587663 1099 ntBASIC17.32■□□□□ 0.36
RC3H1Q5TC82 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 SNX20-205ENST00000610485 557 ntTSL 5 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.32■□□□□ 0.36
RC3H1Q5TC82 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 TPT1P9-201ENST00000413759 514 ntBASIC17.31■□□□□ 0.36
RC3H1Q5TC82 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 RBM14-205ENST00000443702 732 ntTSL 3 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 AC108724.1-201ENST00000481669 352 ntBASIC17.31■□□□□ 0.36
RC3H1Q5TC82 RNA5SP288-201ENST00000516075 93 ntBASIC17.31■□□□□ 0.36
RC3H1Q5TC82 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC17.31■□□□□ 0.36
RC3H1Q5TC82 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms