Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.3□□□□□ -0.28
CFHR1Q03591 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.3□□□□□ -0.28
CFHR1Q03591 NME6-208ENST00000435684 599 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.3□□□□□ -0.28
CFHR1Q03591 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.3□□□□□ -0.28
CFHR1Q03591 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.3□□□□□ -0.28
CFHR1Q03591 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.3□□□□□ -0.28
CFHR1Q03591 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.3□□□□□ -0.28
CFHR1Q03591 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.3□□□□□ -0.28
CFHR1Q03591 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.3□□□□□ -0.28
CFHR1Q03591 AL139424.3-202ENST00000641619 917 ntBASIC13.3□□□□□ -0.28
CFHR1Q03591 FMO6P-201ENST00000236166 1620 ntBASIC13.3□□□□□ -0.28
CFHR1Q03591 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CFHR1Q03591 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CFHR1Q03591 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.3□□□□□ -0.28
CFHR1Q03591 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CFHR1Q03591 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CFHR1Q03591 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 NRADDP-202ENST00000641269 1585 ntBASIC13.29□□□□□ -0.28
CFHR1Q03591 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 ACTBP14-201ENST00000411655 1089 ntBASIC13.29□□□□□ -0.28
CFHR1Q03591 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC13.29□□□□□ -0.28
CFHR1Q03591 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.29□□□□□ -0.28
CFHR1Q03591 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.29□□□□□ -0.28
CFHR1Q03591 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.29□□□□□ -0.28
CFHR1Q03591 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.29□□□□□ -0.28
CFHR1Q03591 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 ALG1L3P-201ENST00000503331 765 ntBASIC13.29□□□□□ -0.28
CFHR1Q03591 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.29□□□□□ -0.28
CFHR1Q03591 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.29□□□□□ -0.28
CFHR1Q03591 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 AC126755.5-201ENST00000622756 267 ntBASIC13.29□□□□□ -0.28
CFHR1Q03591 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
CFHR1Q03591 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 AL109809.1-201ENST00000418979 1367 ntBASIC13.29□□□□□ -0.28
CFHR1Q03591 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CFHR1Q03591 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CFHR1Q03591 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CFHR1Q03591 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CFHR1Q03591 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.28□□□□□ -0.28
CFHR1Q03591 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CFHR1Q03591 AC089987.1-201ENST00000551654 2209 ntBASIC13.28□□□□□ -0.28
CFHR1Q03591 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CFHR1Q03591 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CFHR1Q03591 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CFHR1Q03591 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.28□□□□□ -0.28
CFHR1Q03591 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CFHR1Q03591 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CFHR1Q03591 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms