Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 VENTXP1-201ENST00000569334 2716 ntBASIC12.32□□□□□ -0.44
UBA52P62987 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.32□□□□□ -0.44
UBA52P62987 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 AL354989.2-201ENST00000435838 1540 ntBASIC12.32□□□□□ -0.44
UBA52P62987 LILRP1-201ENST00000444199 1370 ntBASIC12.32□□□□□ -0.44
UBA52P62987 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.32□□□□□ -0.44
UBA52P62987 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.32□□□□□ -0.44
UBA52P62987 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.32□□□□□ -0.44
UBA52P62987 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
UBA52P62987 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.32□□□□□ -0.44
UBA52P62987 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
UBA52P62987 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.32□□□□□ -0.44
UBA52P62987 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.32□□□□□ -0.44
UBA52P62987 RPSAP36-202ENST00000494591 1261 ntBASIC12.32□□□□□ -0.44
UBA52P62987 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 ACTG1P17-201ENST00000558391 1119 ntBASIC12.32□□□□□ -0.44
UBA52P62987 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.32□□□□□ -0.44
UBA52P62987 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.32□□□□□ -0.44
UBA52P62987 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 CICP1-201ENST00000416803 2410 ntBASIC12.32□□□□□ -0.44
UBA52P62987 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
UBA52P62987 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.32□□□□□ -0.44
UBA52P62987 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 AC090643.2-201ENST00000623442 2029 ntBASIC12.32□□□□□ -0.44
UBA52P62987 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBA52P62987 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
UBA52P62987 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 TPM3P8-201ENST00000330554 643 ntBASIC12.31□□□□□ -0.44
UBA52P62987 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
UBA52P62987 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 ACTBP8-201ENST00000403258 1108 ntBASIC12.31□□□□□ -0.44
UBA52P62987 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.31□□□□□ -0.44
UBA52P62987 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.31□□□□□ -0.44
UBA52P62987 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.31□□□□□ -0.44
UBA52P62987 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 RN7SL190P-201ENST00000582519 257 ntBASIC12.31□□□□□ -0.44
UBA52P62987 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.31□□□□□ -0.44
UBA52P62987 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 ECM1P1-201ENST00000604092 1279 ntBASIC12.31□□□□□ -0.44
UBA52P62987 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
UBA52P62987 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms