Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AC012676.5-201ENST00000624337 1955 ntBASIC11.94□□□□□ -0.5
NKX2-5P52952 PLEKHG3-204ENST00000484731 3001 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX2-5P52952 FAM47DP-201ENST00000402340 3290 ntBASIC11.94□□□□□ -0.5
NKX2-5P52952 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NKX2-5P52952 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX2-5P52952 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NKX2-5P52952 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX2-5P52952 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NKX2-5P52952 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 AC134682.1-201ENST00000569285 3377 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 DPY19L2P3-201ENST00000414296 2326 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 MCCC2-201ENST00000340941 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
NKX2-5P52952 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX2-5P52952 AL121723.1-201ENST00000445194 1519 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 LINC01254-201ENST00000566225 2908 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 FAM220BP-201ENST00000377689 816 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.93□□□□□ -0.5
NKX2-5P52952 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.93□□□□□ -0.5
NKX2-5P52952 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 MSTO2P-201ENST00000314835 1709 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
NKX2-5P52952 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX2-5P52952 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 AL365181.2-201ENST00000606343 3222 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NKX2-5P52952 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.93□□□□□ -0.5
NKX2-5P52952 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.93□□□□□ -0.5
NKX2-5P52952 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NKX2-5P52952 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NKX2-5P52952 AC090114.2-201ENST00000608477 7054 ntBASIC11.92□□□□□ -0.5
NKX2-5P52952 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 DCK-204ENST00000504952 2614 ntTSL 3 BASIC11.92□□□□□ -0.5
NKX2-5P52952 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NKX2-5P52952 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 TSPY19P-201ENST00000418461 509 ntBASIC11.92□□□□□ -0.5
NKX2-5P52952 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 TSPY18P-201ENST00000441642 509 ntBASIC11.92□□□□□ -0.5
NKX2-5P52952 TSSC2-201ENST00000450217 709 ntBASIC11.92□□□□□ -0.5
NKX2-5P52952 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.92□□□□□ -0.5
NKX2-5P52952 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX2-5P52952 RN7SL850P-201ENST00000579959 291 ntBASIC11.92□□□□□ -0.5
NKX2-5P52952 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
NKX2-5P52952 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.92□□□□□ -0.5
NKX2-5P52952 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.92□□□□□ -0.5
NKX2-5P52952 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11.92□□□□□ -0.5
NKX2-5P52952 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NKX2-5P52952 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms