Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.43□□□□□ -0.74
CKS2P33552 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.43□□□□□ -0.74
CKS2P33552 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
CKS2P33552 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.43□□□□□ -0.74
CKS2P33552 AC087499.5-201ENST00000452760 1342 ntBASIC10.43□□□□□ -0.74
CKS2P33552 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
CKS2P33552 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 RN7SKP230-201ENST00000365642 335 ntBASIC10.43□□□□□ -0.74
CKS2P33552 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.43□□□□□ -0.74
CKS2P33552 MIR940-201ENST00000401276 94 ntBASIC10.43□□□□□ -0.74
CKS2P33552 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 AC003958.1-201ENST00000435883 421 ntBASIC10.43□□□□□ -0.74
CKS2P33552 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.43□□□□□ -0.74
CKS2P33552 PUDPP3-201ENST00000445368 636 ntBASIC10.43□□□□□ -0.74
CKS2P33552 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.43□□□□□ -0.74
CKS2P33552 AC023141.5-201ENST00000458585 616 ntBASIC10.43□□□□□ -0.74
CKS2P33552 AP000344.2-201ENST00000512987 629 ntBASIC10.43□□□□□ -0.74
CKS2P33552 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.43□□□□□ -0.74
CKS2P33552 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.43□□□□□ -0.74
CKS2P33552 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.43□□□□□ -0.74
CKS2P33552 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 AC009955.4-201ENST00000597192 544 ntBASIC10.43□□□□□ -0.74
CKS2P33552 AC073592.8-201ENST00000624126 511 ntBASIC10.43□□□□□ -0.74
CKS2P33552 AC002472.3-201ENST00000640124 621 ntBASIC10.43□□□□□ -0.74
CKS2P33552 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC10.43□□□□□ -0.74
CKS2P33552 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC10.43□□□□□ -0.74
CKS2P33552 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC10.43□□□□□ -0.74
CKS2P33552 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 AC061965.1-201ENST00000560524 1465 ntBASIC10.42□□□□□ -0.74
CKS2P33552 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.42□□□□□ -0.74
CKS2P33552 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 AL358781.1-202ENST00000321081 1360 ntBASIC10.42□□□□□ -0.74
CKS2P33552 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 AC104758.3-203ENST00000562938 2123 ntBASIC10.42□□□□□ -0.74
CKS2P33552 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.42□□□□□ -0.74
CKS2P33552 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
CKS2P33552 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.42□□□□□ -0.74
CKS2P33552 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.42□□□□□ -0.74
CKS2P33552 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.42□□□□□ -0.74
CKS2P33552 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 ZNF890P-202ENST00000530367 1156 ntBASIC10.42□□□□□ -0.74
CKS2P33552 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.42□□□□□ -0.74
CKS2P33552 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.42□□□□□ -0.74
CKS2P33552 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.42□□□□□ -0.74
CKS2P33552 AL391069.4-201ENST00000609583 481 ntBASIC10.42□□□□□ -0.74
CKS2P33552 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CKS2P33552 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
CKS2P33552 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms