Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VARSP26640 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VARSP26640 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
VARSP26640 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.03□□□□□ -0.16
VARSP26640 FNTAP2-201ENST00000430308 634 ntBASIC14.03□□□□□ -0.16
VARSP26640 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 RN7SL769P-201ENST00000469386 295 ntBASIC14.03□□□□□ -0.16
VARSP26640 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC14.03□□□□□ -0.16
VARSP26640 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.03□□□□□ -0.16
VARSP26640 AC100827.2-201ENST00000563214 1194 ntBASIC14.03□□□□□ -0.16
VARSP26640 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.03□□□□□ -0.16
VARSP26640 AL162426.1-201ENST00000624141 743 ntBASIC14.03□□□□□ -0.16
VARSP26640 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VARSP26640 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.03□□□□□ -0.16
VARSP26640 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VARSP26640 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
VARSP26640 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.02□□□□□ -0.16
VARSP26640 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
VARSP26640 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.02□□□□□ -0.16
VARSP26640 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.02□□□□□ -0.16
VARSP26640 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.02□□□□□ -0.16
VARSP26640 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.02□□□□□ -0.16
VARSP26640 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VARSP26640 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.02□□□□□ -0.16
VARSP26640 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 TUBB8P4-201ENST00000511806 1324 ntBASIC14.02□□□□□ -0.17
VARSP26640 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
VARSP26640 MIR769-201ENST00000390225 118 ntBASIC14.02□□□□□ -0.17
VARSP26640 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.02□□□□□ -0.17
VARSP26640 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 AL354877.1-201ENST00000424412 413 ntBASIC14.02□□□□□ -0.17
VARSP26640 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.02□□□□□ -0.17
VARSP26640 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 AC005077.2-201ENST00000449786 690 ntBASIC14.02□□□□□ -0.17
VARSP26640 RPSAP36-202ENST00000494591 1261 ntBASIC14.02□□□□□ -0.17
VARSP26640 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
VARSP26640 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.02□□□□□ -0.17
VARSP26640 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VARSP26640 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC14.02□□□□□ -0.17
VARSP26640 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 MIR3619-201ENST00000579667 83 ntBASIC14.02□□□□□ -0.17
VARSP26640 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.02□□□□□ -0.17
VARSP26640 NDUFV2P1-201ENST00000596415 907 ntBASIC14.02□□□□□ -0.17
VARSP26640 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC14.02□□□□□ -0.17
VARSP26640 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
VARSP26640 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.02□□□□□ -0.17
VARSP26640 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC14.02□□□□□ -0.17
VARSP26640 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
VARSP26640 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.02□□□□□ -0.17
VARSP26640 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
VARSP26640 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms