Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.24□□□□□ -0.29
NR4A1P22736 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NR4A1P22736 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NR4A1P22736 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NR4A1P22736 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NR4A1P22736 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.23□□□□□ -0.29
NR4A1P22736 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.23□□□□□ -0.29
NR4A1P22736 KRT43P-201ENST00000434019 910 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.23□□□□□ -0.29
NR4A1P22736 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.23□□□□□ -0.29
NR4A1P22736 AL355864.2-201ENST00000447420 863 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 GPR53P-205ENST00000457298 1084 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.23□□□□□ -0.29
NR4A1P22736 AP001889.1-201ENST00000525414 633 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 KRT17P8-201ENST00000540749 863 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.23□□□□□ -0.29
NR4A1P22736 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 PRSS30P-206ENST00000641773 873 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 DLX4-206ENST00000611342 1662 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A1P22736 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.23□□□□□ -0.29
NR4A1P22736 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NR4A1P22736 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.23□□□□□ -0.29
NR4A1P22736 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.23□□□□□ -0.29
NR4A1P22736 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 AL928654.5-201ENST00000624831 2501 ntBASIC13.22□□□□□ -0.29
NR4A1P22736 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 AC004623.1-201ENST00000624592 2127 ntBASIC13.22□□□□□ -0.29
NR4A1P22736 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
NR4A1P22736 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NR4A1P22736 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A1P22736 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NR4A1P22736 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A1P22736 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.22□□□□□ -0.29
NR4A1P22736 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NR4A1P22736 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.22□□□□□ -0.29
NR4A1P22736 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 GK-202ENST00000378941 458 ntTSL 3 BASIC13.22□□□□□ -0.29
NR4A1P22736 HLA-K-203ENST00000430151 1046 ntBASIC13.22□□□□□ -0.29
NR4A1P22736 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NR4A1P22736 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.22□□□□□ -0.29
NR4A1P22736 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.22□□□□□ -0.29
NR4A1P22736 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NR4A1P22736 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.22□□□□□ -0.29
NR4A1P22736 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms