Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.26□□□□□ -0.13
HLA-DPA1P20036 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 CYP46A4P-201ENST00000414953 267 ntBASIC14.26□□□□□ -0.13
HLA-DPA1P20036 OR8T1P-201ENST00000421347 918 ntBASIC14.26□□□□□ -0.13
HLA-DPA1P20036 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 AC116345.2-201ENST00000512837 523 ntBASIC14.26□□□□□ -0.13
HLA-DPA1P20036 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 FP325330.2-201ENST00000624219 5630 ntBASIC14.26□□□□□ -0.13
HLA-DPA1P20036 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DPA1P20036 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 FAM90A12P-201ENST00000519497 2375 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 FAM90A24P-201ENST00000520792 2369 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AC089987.1-201ENST00000551654 2209 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 BX679664.3-201ENST00000414070 555 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 ISCA2P1-201ENST00000425548 448 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AC113935.1-201ENST00000471722 555 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 POU5F1P2-201ENST00000521750 823 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AC103810.3-201ENST00000583567 96 ntBASIC14.25□□□□□ -0.13
HLA-DPA1P20036 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DPA1P20036 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms