Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC18.92■□□□□ 0.62
ATF3P18847 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATF3P18847 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.92■□□□□ 0.62
ATF3P18847 AC069421.1-201ENST00000447462 323 ntBASIC18.92■□□□□ 0.62
ATF3P18847 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC18.92■□□□□ 0.62
ATF3P18847 MTHFD2P7-201ENST00000483867 983 ntBASIC18.92■□□□□ 0.62
ATF3P18847 RN7SL2-201ENST00000490232 300 ntBASIC18.92■□□□□ 0.62
ATF3P18847 AC099343.1-201ENST00000513481 609 ntBASIC18.92■□□□□ 0.62
ATF3P18847 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC18.92■□□□□ 0.62
ATF3P18847 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC18.92■□□□□ 0.62
ATF3P18847 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.92■□□□□ 0.62
ATF3P18847 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 RN7SL4P-201ENST00000584058 295 ntBASIC18.92■□□□□ 0.62
ATF3P18847 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC18.92■□□□□ 0.62
ATF3P18847 AC021321.1-201ENST00000607397 1113 ntBASIC18.92■□□□□ 0.62
ATF3P18847 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 AC106785.2-201ENST00000564385 1319 ntBASIC18.92■□□□□ 0.62
ATF3P18847 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC18.92■□□□□ 0.62
ATF3P18847 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ATF3P18847 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.92■□□□□ 0.62
ATF3P18847 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.92■□□□□ 0.62
ATF3P18847 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
ATF3P18847 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 AC015813.5-201ENST00000624641 1514 ntBASIC18.91■□□□□ 0.62
ATF3P18847 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ATF3P18847 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.91■□□□□ 0.62
ATF3P18847 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC18.91■□□□□ 0.62
ATF3P18847 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 RBP4-203ENST00000371469 814 ntTSL 5 BASIC18.91■□□□□ 0.62
ATF3P18847 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC18.91■□□□□ 0.62
ATF3P18847 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC18.91■□□□□ 0.62
ATF3P18847 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.91■□□□□ 0.62
ATF3P18847 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC18.91■□□□□ 0.62
ATF3P18847 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 AC103724.2-201ENST00000520355 476 ntBASIC18.91■□□□□ 0.62
ATF3P18847 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC18.91■□□□□ 0.62
ATF3P18847 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC18.91■□□□□ 0.62
ATF3P18847 RN7SL202P-201ENST00000584410 262 ntBASIC18.91■□□□□ 0.62
ATF3P18847 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC18.91■□□□□ 0.62
ATF3P18847 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC18.91■□□□□ 0.62
ATF3P18847 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC18.91■□□□□ 0.62
ATF3P18847 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ATF3P18847 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
ATF3P18847 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATF3P18847 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ATF3P18847 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ATF3P18847 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC18.9■□□□□ 0.62
ATF3P18847 AC105443.1-201ENST00000433754 712 ntBASIC18.9■□□□□ 0.62
ATF3P18847 DUX4L31-201ENST00000446466 1136 ntBASIC18.9■□□□□ 0.62
ATF3P18847 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.9■□□□□ 0.62
ATF3P18847 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATF3P18847 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms